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As with hair colour the pigment melanin is involved in determining eye colour. The process involves several genes and the molecular pathways and patterns by which the colour is created is still not fully understood. A recessive mode of inheritance is what lies behind
blue eyes, and bey2 and gey, are the two genes that work together to make brown, green, or blue eyes. These are the names of theoretical genes to help to explain eye colour genetics. Though a recent discovery confirmed that bey2 is a gene known as OCA2.
The picture for people with hazel eyes is a little misty at the moment and has received relatively little attention. There are several competing theoretical models to try and explain the phenomenon.
A break through in the understanding of eye colour genetics came in 2006 when researchers from the University of Queensland in Australia discovered that variation in eye colour is down to just a few changes in single stranded nucleotide sequences known as single polynucleotide polymorphisms ("snips"). According to the study the genetic changes were not actually responsible for changing eye colour but they are linked to something that is. The changes occurred near the OCA2 gene. Incidentally, mutations in this gene cause the most common form of albinism. The research also confirmed that there is no single gene for eye colour.