One thing that is extremely harmful and which leads to increase in microbial infestation is water in oil. It is extremely important to remove oil from the system in order to avoid contamination. If water is there in the oil, in presence of oxygen and appropriate temperature condition, the bacteria multiplies ,infesting the system. Thus removal of water or reducing its presence to minimum is the best method to prevent microbial infestation. Moreover, it is also required to keep the temperature at the extremes to prevent bacteria growth. The higher the temperature at settling, service and drain tank of fuel oils, the better.
One more method to prevent contamination is by adding chemicals to the oil. Standardized test kits are available to detect the presence of bacteria in the oil. Biocides can also be used to kill the bacteria present in the system. In case the system is treated with chemicals, it is imperative that it is completely flushed out at the end to prevent contamination of fresh oil.